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In Progress
Clinical

GSE40400

Purpose

Polycystic ovary syndrome (PCOS) is a common endocrine and metabolic disorder that is characterized by increased circulating androgen levels, anovulatory infertility, and frequently, insulin resistance and hyperinsulinemia.The abnormity of oocyte nuclear maturity is the main reason for anovulatory infertility and pregnancy loss in PCOS patients.The bidirectional exchanges between oocyte and contiguous CCs are important for oocyte competence acquisition, early embryonic development and CC expansion.Gene expression profiles of CCs has been suggested to predict embryo development and pregnancy outcome.We used microarrays to detail the global programme of gene expression of CCs isolated from oocytes at metaphase I (CCMI) and metaphase II (CCMII) stage under controlled ovarian stimulation (COS) cycle in PCOS patients.

Hypothesis

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Experimental Design

Cumulus cells were isolated from oocyte at stage metaphase 1(MI)and stage metaphase II (MII) of PCOS patients for RNA extraction and hybridization on Affymetrix microarrays. For microarray analysis, we used three chips for each CC category. That is, CCMI1,CCMI2,CCMI3,CCMII1,CCMII2 and CCMII3.

Experimental Variables

Cumulus cells

Controls

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Methods

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Additional Information

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Microarray
Affymetrix HG-U133_Plus_2
6 Samples Loaded: 6
Human (Homo sapiens)
cumulus cells
Polycystic ovary syndrome
Sample Set Spreadsheet
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Samples Preview
Sample ID !Sample Title group Cell type Cell cyle Disease state
GSM992854 Cumulus cells from oocyte at MII stage , biological rep1 Metaphase II Cumulus cells metaphase II Polycystic ovary syndrome
GSM992855 Cumulus cells from oocyte at MII stage , biological rep2 Metaphase II Cumulus cells metaphase II Polycystic ovary syndrome
GSM992856 Cumulus cells from oocyte at MII stage , biological rep3 Metaphase II Cumulus cells metaphase II Polycystic ovary syndrome
GSM992857 Cumulus cells from oocyte at MI stage , biological rep1 Metaphase I Cumulus cells metaphase I Polycystic ovary syndrome
GSM992858 Cumulus cells from oocyte at MI stage , biological rep2 Metaphase I Cumulus cells metaphase I Polycystic ovary syndrome
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File
sampleset4000030_sampleannotations-modified.csv
Sample Set Spreadsheet
sampleset4000030_sampleannotations-modified.csv
Sample Set Spreadsheet
Raw Signal
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Sample ID !Sample Title Group Cell type Cell cyle Disease state
GSM992854
Cumulus cells from oocyte at MII stage , biological rep1
Metaphase II
Cumulus cells
metaphase II
Polycystic ovary syndrome
GSM992855
Cumulus cells from oocyte at MII stage , biological rep2
Metaphase II
Cumulus cells
metaphase II
Polycystic ovary syndrome
GSM992856
Cumulus cells from oocyte at MII stage , biological rep3
Metaphase II
Cumulus cells
metaphase II
Polycystic ovary syndrome
GSM992857
Cumulus cells from oocyte at MI stage , biological rep1
Metaphase I
Cumulus cells
metaphase I
Polycystic ovary syndrome
GSM992858
Cumulus cells from oocyte at MI stage , biological rep2
Metaphase I
Cumulus cells
metaphase I
Polycystic ovary syndrome
GSM992859
Cumulus cells from oocyte at MI stage , biological rep3
Metaphase I
Cumulus cells
metaphase I
Polycystic ovary syndrome

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