GSE37277
Single embryo transfer (SET) is the most successful way to reduce the frequency of multiple pregnancies during in vitro fertilisation. However, selecting the embryo with the highest chances of pregnancy for SET remains a difficult challenge, since morphological and kinetics criteria provide poor prediction of both developmental and implantation ability. Partly through the expression of specific genes, the oocyte-cumulus interaction helps the oocyte to acquire its developmental competence. Our aim was therefore to identify at the level of cumulus cells (CCs) any genes related to oocyte developmental competence.
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individual Cumulus Cells (CCs) were collected from patients undergoing an intra-cytoplasmic sperm injection procedure. Gene expression of CCs was studied using microarray according to the nuclear maturity of the oocyte (immature vs. mature oocyte) and to the developmental competence of the oocyte (ability to reach the blastocyst stage after fertilisation).
Cumulus cells from the following stages: Blastocyst, immature oocytes and poor quality embryos
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Microarray
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Sample ID | !Sample Title | group | Cell type | Oocyte developmental competence |
---|---|---|---|---|
GSM910918 | blastocyst [B12_1] | blastocyst | Cumulus cells | B |
GSM910919 | blastocyst [B12_2] | blastocyst | Cumulus cells | B |
GSM910920 | embryo of poor quality [E38_3] | embryo of poor quality | Cumulus cells | E |
GSM910921 | embryo of poor quality [E15_4] | embryo of poor quality | Cumulus cells | E |
GSM910922 | immature oocytes [VG8_5] | immature oocytes | Cumulus cells | VG |
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Sample ID | !Sample Title | Group | Cell type | Oocyte developmental competence |
---|---|---|---|---|
GSM910918 | blastocyst [B12_1] |
blastocyst |
Cumulus cells |
B |
GSM910919 | blastocyst [B12_2] |
blastocyst |
Cumulus cells |
B |
GSM910920 | embryo of poor quality [E38_3] |
embryo of poor quality |
Cumulus cells |
E |
GSM910921 | embryo of poor quality [E15_4] |
embryo of poor quality |
Cumulus cells |
E |
GSM910922 | immature oocytes [VG8_5] |
immature oocytes |
Cumulus cells |
VG |
GSM910923 | immature oocytes [VG10_6] |
immature oocytes |
Cumulus cells |
VG |
GSM910924 | blastocyst [B4_7] |
blastocyst |
Cumulus cells |
B |
GSM910925 | blastocyst [B2_8] |
blastocyst |
Cumulus cells |
B |
GSM910926 | immature oocytes [VG19_9] |
immature oocytes |
Cumulus cells |
VG |
GSM910927 | immature oocytes [VG16_10] |
immature oocytes |
Cumulus cells |
VG |
GSM910928 | blastocyst [B7_11] |
blastocyst |
Cumulus cells |
B |
GSM910929 | blastocyst [B10_12] |
blastocyst |
Cumulus cells |
B |
GSM910930 | immature oocytes [VG23_13] |
immature oocytes |
Cumulus cells |
VG |
GSM910931 | blastocyst [B41_14] |
blastocyst |
Cumulus cells |
B |
GSM910932 | embryo of poor quality [E19_15] |
embryo of poor quality |
Cumulus cells |
E |
GSM910933 | embryo of poor quality [E12_16] |
embryo of poor quality |
Cumulus cells |
E |
GSM910934 | blastocyst [B13_17] |
blastocyst |
Cumulus cells |
B |
GSM910935 | blastocyst [B31_18] |
blastocyst |
Cumulus cells |
B |
GSM910936 | immature oocytes [VG28_19] |
immature oocytes |
Cumulus cells |
VG |
GSM910937 | immature oocytes [VG28_20] |
immature oocytes |
Cumulus cells |
VG |
GSM910938 | embryo of poor quality [E1_21] |
embryo of poor quality |
Cumulus cells |
E |
GSM910939 | embryo of poor quality [E3_22] |
embryo of poor quality |
Cumulus cells |
E |
GSM910940 | immature oocytes [VG1_23] |
immature oocytes |
Cumulus cells |
VG |
GSM910941 | immature oocytes [VG2_24] |
immature oocytes |
Cumulus cells |
VG |
GSM910942 | embryo of poor quality [E23_25] |
embryo of poor quality |
Cumulus cells |
E |
GSM910943 | embryo of poor quality [E13_26] |
embryo of poor quality |
Cumulus cells |
E |
GSM910944 | immature oocytes [VG15_27] |
immature oocytes |
Cumulus cells |
VG |
GSM910945 | immature oocytes [VG12_28] |
immature oocytes |
Cumulus cells |
VG |
GSM910946 | blastocyst [B23_29] |
blastocyst |
Cumulus cells |
B |
GSM910947 | blastocyst [B39_30] |
blastocyst |
Cumulus cells |
B |
GSM910948 | embryo of poor quality [E39_31] |
embryo of poor quality |
Cumulus cells |
E |
GSM910949 | embryo of poor quality [E48_32] |
embryo of poor quality |
Cumulus cells |
E |
GSM910972 | embryo of poor quality [E71] |
embryo of poor quality |
Cumulus cells |
E |
GSM910973 | embryo of poor quality [E83] |
embryo of poor quality |
Cumulus cells |
E |
GSM910974 | embryo of poor quality [E38a] |
embryo of poor quality |
Cumulus cells |
E |
GSM910975 | blastocyst [B96] |
blastocyst |
Cumulus cells |
B |
GSM910976 | embryo of poor quality [E39a] |
embryo of poor quality |
Cumulus cells |
E |
GSM910977 | embryo of poor quality [E95] |
embryo of poor quality |
Cumulus cells |
E |
GSM910978 | blastocyst [B13a] |
blastocyst |
Cumulus cells |
B |
GSM910979 | embryo of poor quality [E70] |
embryo of poor quality |
Cumulus cells |
E |
GSM910980 | blastocyst [B87] |
blastocyst |
Cumulus cells |
B |
GSM910981 | blastocyst [B61] |
blastocyst |
Cumulus cells |
B |
GSM910982 | embryo of poor quality [E38b] |
embryo of poor quality |
Cumulus cells |
E |
GSM910983 | embryo of poor quality [E92] |
embryo of poor quality |
Cumulus cells |
E |
GSM910984 | embryo of poor quality [E71-80] |
embryo of poor quality |
Cumulus cells |
E |
GSM910985 | blastocyst [B96-65] |
blastocyst |
Cumulus cells |
B |
GSM910986 | embryo of poor quality [E39b] |
embryo of poor quality |
Cumulus cells |
E |
GSM910987 | embryo of poor quality [E95-65] |
embryo of poor quality |
Cumulus cells |
E |
GSM910988 | blastocyst [B87-65] |
blastocyst |
Cumulus cells |
B |
GSM910989 | blastocyst [B100] |
blastocyst |
Cumulus cells |
B |
GSM910990 | embryo of poor quality [E71-50] |
embryo of poor quality |
Cumulus cells |
E |
GSM910991 | blastocyst [B88] |
blastocyst |
Cumulus cells |
B |
GSM910992 | blastocyst [B13b] |
blastocyst |
Cumulus cells |
B |
GSM910993 | embryo of poor quality [E95-80] |
embryo of poor quality |
Cumulus cells |
E |
GSM910994 | blastocyst [B87-80] |
blastocyst |
Cumulus cells |
B |
GSM910995 | blastocyst [B96-80] |
blastocyst |
Cumulus cells |
B |
GSM910996 | blastocyst [B100_40] |
blastocyst |
Cumulus cells |
B |
GSM910997 | blastocyst [B101_39] |
blastocyst |
Cumulus cells |
B |
GSM910998 | blastocyst [B40_27] |
blastocyst |
Cumulus cells |
B |
GSM910999 | blastocyst [B47_22] |
blastocyst |
Cumulus cells |
B |
GSM911000 | blastocyst [B50_12] |
blastocyst |
Cumulus cells |
B |
GSM911001 | blastocyst [B53_28] |
blastocyst |
Cumulus cells |
B |
GSM911002 | blastocyst [B60_2] |
blastocyst |
Cumulus cells |
B |
GSM911003 | blastocyst [B61_6] |
blastocyst |
Cumulus cells |
B |
GSM911004 | blastocyst [B63_5] |
blastocyst |
Cumulus cells |
B |
GSM911005 | blastocyst [B64_1] |
blastocyst |
Cumulus cells |
B |
GSM911006 | blastocyst [B67_21] |
blastocyst |
Cumulus cells |
B |
GSM911007 | blastocyst [B76_31] |
blastocyst |
Cumulus cells |
B |
GSM911008 | blastocyst [B79_17] |
blastocyst |
Cumulus cells |
B |
GSM911009 | blastocyst [B83_32] |
blastocyst |
Cumulus cells |
B |
GSM911010 | blastocyst [B87_35] |
blastocyst |
Cumulus cells |
B |
GSM911011 | blastocyst [B88_36] |
blastocyst |
Cumulus cells |
B |
GSM911012 | blastocyst [B93_11] |
blastocyst |
Cumulus cells |
B |
GSM911013 | blastocyst [B99_18] |
blastocyst |
Cumulus cells |
B |
GSM911014 | embryo of poor quality [E16_24] |
embryo of poor quality |
Cumulus cells |
E |
GSM911015 | embryo of poor quality [E20_19] |
embryo of poor quality |
Cumulus cells |
E |
GSM911016 | embryo of poor quality [E24_29] |
embryo of poor quality |
Cumulus cells |
E |
GSM911017 | embryo of poor quality [E30_26] |
embryo of poor quality |
Cumulus cells |
E |
GSM911018 | embryo of poor quality [E37_13] |
embryo of poor quality |
Cumulus cells |
E |
GSM911019 | embryo of poor quality [E49_23] |
embryo of poor quality |
Cumulus cells |
E |
GSM911020 | embryo of poor quality [E53_20] |
embryo of poor quality |
Cumulus cells |
E |
GSM911021 | embryo of poor quality [E56_4] |
embryo of poor quality |
Cumulus cells |
E |
GSM911022 | embryo of poor quality [E57_3] |
embryo of poor quality |
Cumulus cells |
E |
GSM911023 | embryo of poor quality [E66_30] |
embryo of poor quality |
Cumulus cells |
E |
GSM911024 | embryo of poor quality [E68_9] |
embryo of poor quality |
Cumulus cells |
E |
GSM911025 | embryo of poor quality [E74_37] |
embryo of poor quality |
Cumulus cells |
E |
GSM911026 | embryo of poor quality [E83_34] |
embryo of poor quality |
Cumulus cells |
E |
GSM911027 | embryo of poor quality [E89_33] |
embryo of poor quality |
Cumulus cells |
E |
GSM911028 | embryo of poor quality [E92_14] |
embryo of poor quality |
Cumulus cells |
E |
GSM911029 | embryo of poor quality [E95_10] |
embryo of poor quality |
Cumulus cells |
E |
GSM911030 | embryo of poor quality [E97_38] |
embryo of poor quality |
Cumulus cells |
E |
GSM911031 | embryo of poor quality [E98_25] |
embryo of poor quality |
Cumulus cells |
E |
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